PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10371
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 550aa    MW: 57661.9 Da    PI: 9.6278
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10371genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.75.5e-29212271159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dg++WrKYGqK  kg+++pr+YYrCt + gCpv+k+v+r+aed ++++ tYeg Hnh+
  EMT10371 212 MNDGCQWRKYGQKISKGNPCPRAYYRCTVEtGCPVRKQVQRCAEDMSILISTYEGAHNHP 271
               58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081127.703207273IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.8E-29209271IPR003657WRKY domain
SuperFamilySSF1182902.22E-25211272IPR003657WRKY domain
SMARTSM007742.6E-35212272IPR003657WRKY domain
PfamPF031061.4E-25213271IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MIKGDQRQLG GHEERLKDQM RDDHRASDGN FFKFLQNQSS TKKEAQEDKI ASTRAEMGEV  60
RKENERLKIM LSRMVEDHRS LQKQFDVLHH QGRGKDIAVG SPEHTSAVDG PGFVSLHLGT  120
SAGMSRQNMG EEIKGSTNNP DDKGIFLGLS SACGAVGART DGSETKVRPD VVTLSPGGSS  180
KEEAAETTTS ATASKMAKNP RSTGSGAVTE EMNDGCQWRK YGQKISKGNP CPRAYYRCTV  240
ETGCPVRKQV QRCAEDMSIL ISTYEGAHNH PLSASATAMA STTSAAASML VSGSSTSLGF  300
PSAASSLHGL RFGIPGVASS TSTNELGGRP FFLPAAAGAS ISATPSYPTI TLDLTSQAAS  360
QQAFSLSNTN RFSSSSTGSY GHNTSAGRYP STSFSFSGSG ASSLPGATPW PAGVGSYLSY  420
GSSPSAPYNG AGKSSFEAAL SGINGRQQGS AAFLYQPVQQ RAAPVSGGST APTVLTDTIA  480
KAITSDPGFH TALAAAITSY VGKPAAGGSK GLEWGEAWGP PLRQPRRARR QCWHDRHQRG  540
PHRAVPQTAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-192122741778Probable WRKY transcription factor 4
2lex_A1e-192122741778Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2485550.0AK248555.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf78b10, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643469.11e-148PREDICTED: probable WRKY transcription factor 72 isoform X2
TrEMBLM8B8Q80.0M8B8Q8_AEGTA; Uncharacterized protein
STRINGMLOC_60283.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.13e-43WRKY DNA-binding protein 61